Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.74■□□□□ 0.27
RP1L1Q8IWN7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 IGHV3-47-201ENST00000425060 335 ntBASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 AC140113.2-201ENST00000604370 208 ntBASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 TCF3P1-201ENST00000423021 1937 ntBASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RP1L1Q8IWN7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 AC091607.1-201ENST00000490318 1060 ntBASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 MIR3180-5-201ENST00000583743 153 ntBASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 PMS2P7-201ENST00000506558 1336 ntBASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 AP001005.1-201ENST00000571755 1248 ntBASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RP1L1Q8IWN7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.71■□□□□ 0.27
RP1L1Q8IWN7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 RNPS1P1-201ENST00000507437 918 ntBASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
RP1L1Q8IWN7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms