Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NPAS4Q8IUM7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 AL591684.3-201ENST00000605187 298 ntBASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.82■□□□□ 0.76
NPAS4Q8IUM7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 MIR149-201ENST00000384879 89 ntBASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 AL590627.1-203ENST00000421194 1026 ntBASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 AC113404.2-201ENST00000507884 177 ntBASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 GPALPP1-207ENST00000611650 899 ntBASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS4Q8IUM7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 AC096582.2-201ENST00000510860 516 ntBASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 AP001005.1-201ENST00000571755 1248 ntBASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 MIR5100-201ENST00000579544 119 ntBASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 AC114341.1-201ENST00000618070 349 ntBASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPAS4Q8IUM7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 AC006538.3-201ENST00000612495 578 ntBASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 AL773604.1-201ENST00000617417 272 ntBASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.79■□□□□ 0.76
NPAS4Q8IUM7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 AC093484.2-201ENST00000580996 2166 ntBASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.78■□□□□ 0.76
NPAS4Q8IUM7 FAM197Y8-203ENST00000450145 560 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms