Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 PVRIG2P-201ENST00000435460 978 ntBASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 AC079602.3-201ENST00000623931 403 ntBASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 CROCCP3-202ENST00000420820 1947 ntBASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRTM4Q86VH4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRRTM4Q86VH4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRRTM4Q86VH4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 AL391807.1-203ENST00000604392 2365 ntBASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRTM4Q86VH4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 HLA-F-220ENST00000434407 884 ntBASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 FAM86EP-206ENST00000510506 987 ntBASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 VENTXP5-201ENST00000523979 775 ntBASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 AL136038.3-201ENST00000561909 1096 ntBASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM4Q86VH4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 AC098818.2-201ENST00000564925 2320 ntBASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 MIR149-201ENST00000384879 89 ntBASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM4Q86VH4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms