Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 TFP1-202ENST00000475455 1573 ntBASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 AC083906.2-201ENST00000511578 360 ntBASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 DOC2GP-204ENST00000639052 2548 ntBASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
YTHDF3Q7Z739 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 HEIH-201ENST00000623091 1652 ntBASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 KRT18P6-201ENST00000555540 1265 ntBASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 MYC-208ENST00000641036 567 ntBASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
YTHDF3Q7Z739 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 TSPY6P-201ENST00000448518 926 ntBASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 AC231657.2-201ENST00000624556 255 ntBASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 FLJ38576-201ENST00000623820 2459 ntBASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 AC105020.1-201ENST00000435356 2205 ntBASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YTHDF3Q7Z739 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
YTHDF3Q7Z739 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
YTHDF3Q7Z739 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
YTHDF3Q7Z739 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms