Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 AL353807.1-201ENST00000427475 662 ntBASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.28■■□□□ 1
PDZRN4Q6ZMN7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 BX088651.1-201ENST00000540551 451 ntBASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 AF186192.3-201ENST00000583427 947 ntBASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 AC004264.1-201ENST00000608354 794 ntBASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 OR6D1P-202ENST00000641007 5290 ntBASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDZRN4Q6ZMN7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.27■□□□□ 0.99
PDZRN4Q6ZMN7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.27■□□□□ 0.99
PDZRN4Q6ZMN7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PDZRN4Q6ZMN7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PDZRN4Q6ZMN7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.27■□□□□ 0.99
PDZRN4Q6ZMN7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 REXO1L12P-201ENST00000622156 912 ntBASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.26■□□□□ 0.99
PDZRN4Q6ZMN7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDZRN4Q6ZMN7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms