Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CD109Q6YHK3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 AC254562.1-201ENST00000417586 456 ntBASIC28.06■■■□□ 2.08
CD109Q6YHK3 LAGE3P1-201ENST00000425356 484 ntBASIC28.06■■■□□ 2.08
CD109Q6YHK3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CD109Q6YHK3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CD109Q6YHK3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC28.05■■■□□ 2.08
CD109Q6YHK3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC28.05■■■□□ 2.08
CD109Q6YHK3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC28.05■■■□□ 2.08
CD109Q6YHK3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC28.05■■■□□ 2.08
CD109Q6YHK3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC28.05■■■□□ 2.08
CD109Q6YHK3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CD109Q6YHK3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CD109Q6YHK3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CD109Q6YHK3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CD109Q6YHK3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 AC005829.1-201ENST00000570002 483 ntBASIC28.04■■■□□ 2.08
CD109Q6YHK3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CD109Q6YHK3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 AL163051.1-201ENST00000569214 1512 ntBASIC28.04■■■□□ 2.08
CD109Q6YHK3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CD109Q6YHK3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC28.04■■■□□ 2.08
CD109Q6YHK3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC28.03■■■□□ 2.08
CD109Q6YHK3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.03■■■□□ 2.08
CD109Q6YHK3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC28.03■■■□□ 2.08
CD109Q6YHK3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CD109Q6YHK3 GABARAPL3-202ENST00000624044 1851 ntBASIC28.02■■■□□ 2.08
CD109Q6YHK3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 AL645939.2-201ENST00000427340 991 ntBASIC28.02■■■□□ 2.08
CD109Q6YHK3 KRT18P41-201ENST00000518924 1277 ntBASIC28.02■■■□□ 2.08
CD109Q6YHK3 SNHG9-202ENST00000564014 471 ntBASIC28.02■■■□□ 2.08
CD109Q6YHK3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CD109Q6YHK3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 AC239800.4-201ENST00000603712 296 ntBASIC28.02■■■□□ 2.08
CD109Q6YHK3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CD109Q6YHK3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC28.02■■■□□ 2.08
CD109Q6YHK3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CD109Q6YHK3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CD109Q6YHK3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CD109Q6YHK3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.08
CD109Q6YHK3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC28.01■■■□□ 2.08
CD109Q6YHK3 MIR4469-201ENST00000583919 79 ntBASIC28.01■■■□□ 2.08
CD109Q6YHK3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC28.01■■■□□ 2.07
CD109Q6YHK3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC28.01■■■□□ 2.07
CD109Q6YHK3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC28.01■■■□□ 2.07
CD109Q6YHK3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CD109Q6YHK3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CD109Q6YHK3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC28.01■■■□□ 2.07
CD109Q6YHK3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.01■■■□□ 2.07
CD109Q6YHK3 UBQLN4P1-201ENST00000461599 1801 ntBASIC28■■■□□ 2.07
CD109Q6YHK3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
CD109Q6YHK3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
CD109Q6YHK3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CD109Q6YHK3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC28■■■□□ 2.07
CD109Q6YHK3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28■■■□□ 2.07
CD109Q6YHK3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC28■■■□□ 2.07
CD109Q6YHK3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC28■■■□□ 2.07
CD109Q6YHK3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CD109Q6YHK3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CD109Q6YHK3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC28■■■□□ 2.07
CD109Q6YHK3 KRT18P27-201ENST00000427733 1299 ntBASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms