Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 DOC2GP-204ENST00000639052 2548 ntBASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM88Q6PEY1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 AC104187.1-201ENST00000607510 612 ntBASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM88Q6PEY1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.96□□□□□ -0.01
TMEM88Q6PEY1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMEM88Q6PEY1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.95□□□□□ -0.02
TMEM88Q6PEY1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms