Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 LINC01238-205ENST00000567549 1107 ntBASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 HOMER2P1-201ENST00000455653 964 ntBASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD3Q6PCD5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 MIR564-202ENST00000385049 94 ntBASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 MYC-208ENST00000641036 567 ntBASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD3Q6PCD5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 HEIH-201ENST00000623091 1652 ntBASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD3Q6PCD5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 PCDHB18P-201ENST00000524813 2368 ntBASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.26■□□□□ 0.67
RFWD3Q6PCD5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms