Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 AC009065.1-201ENST00000564055 1225 ntBASIC16.21■□□□□ 0.19
FAM27BQ5VT28 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.21■□□□□ 0.19
FAM27BQ5VT28 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.21■□□□□ 0.18
FAM27BQ5VT28 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
FAM27BQ5VT28 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM27BQ5VT28 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 ECEL1P3-201ENST00000427961 737 ntBASIC16.2■□□□□ 0.18
FAM27BQ5VT28 AC009947.2-201ENST00000444014 672 ntBASIC16.2■□□□□ 0.18
FAM27BQ5VT28 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 AC012306.2-201ENST00000609350 630 ntBASIC16.2■□□□□ 0.18
FAM27BQ5VT28 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FAM27BQ5VT28 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 MIR149-201ENST00000384879 89 ntBASIC16.19■□□□□ 0.18
FAM27BQ5VT28 AP000523.1-201ENST00000398242 1049 ntBASIC16.19■□□□□ 0.18
FAM27BQ5VT28 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 AC097493.4-201ENST00000641197 219 ntBASIC16.19■□□□□ 0.18
FAM27BQ5VT28 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM27BQ5VT28 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 AC009102.3-201ENST00000623118 1491 ntBASIC16.18■□□□□ 0.18
FAM27BQ5VT28 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM27BQ5VT28 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms