Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.58■□□□□ 0.73
VARS2Q5ST30 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VARS2Q5ST30 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VARS2Q5ST30 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.58■□□□□ 0.72
VARS2Q5ST30 AC090616.6-201ENST00000582640 721 ntBASIC19.58■□□□□ 0.72
VARS2Q5ST30 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.58■□□□□ 0.72
VARS2Q5ST30 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.58■□□□□ 0.72
VARS2Q5ST30 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VARS2Q5ST30 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VARS2Q5ST30 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VARS2Q5ST30 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 AC246785.2-201ENST00000432512 513 ntBASIC19.57■□□□□ 0.72
VARS2Q5ST30 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 TOB2P1-201ENST00000469761 992 ntBASIC19.57■□□□□ 0.72
VARS2Q5ST30 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 AP000867.3-201ENST00000524675 377 ntBASIC19.57■□□□□ 0.72
VARS2Q5ST30 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 IGHV3-41-201ENST00000613121 348 ntBASIC19.57■□□□□ 0.72
VARS2Q5ST30 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VARS2Q5ST30 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
VARS2Q5ST30 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 KRT89P-201ENST00000620027 1478 ntBASIC19.56■□□□□ 0.72
VARS2Q5ST30 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARS2Q5ST30 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
VARS2Q5ST30 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.55■□□□□ 0.72
VARS2Q5ST30 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.55■□□□□ 0.72
VARS2Q5ST30 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 NUS1P1-201ENST00000446295 882 ntBASIC19.55■□□□□ 0.72
VARS2Q5ST30 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.55■□□□□ 0.72
VARS2Q5ST30 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.55■□□□□ 0.72
VARS2Q5ST30 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
VARS2Q5ST30 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARS2Q5ST30 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 MIR149-201ENST00000384879 89 ntBASIC19.54■□□□□ 0.72
VARS2Q5ST30 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARS2Q5ST30 AC099343.3-201ENST00000605834 2503 ntBASIC19.54■□□□□ 0.72
VARS2Q5ST30 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.54■□□□□ 0.72
VARS2Q5ST30 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms