Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 AC008040.2-201ENST00000461049 708 ntBASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 AL109659.2-201ENST00000606809 1674 ntBASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RUNDC3AQ59EK9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 AP002982.1-201ENST00000492365 877 ntBASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 RN7SL471P-201ENST00000580476 299 ntBASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
RUNDC3AQ59EK9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 AC011298.2-201ENST00000617989 482 ntBASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 AC130371.2-201ENST00000619443 611 ntBASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms