Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CX3CL1P78423 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CL1P78423 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.94□□□□□ -0.02
CX3CL1P78423 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CL1P78423 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CL1P78423 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CL1P78423 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CL1P78423 KRT8P32-201ENST00000512863 1461 ntBASIC14.94□□□□□ -0.02
CX3CL1P78423 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CX3CL1P78423 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CX3CL1P78423 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CX3CL1P78423 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CX3CL1P78423 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CL1P78423 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CL1P78423 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CX3CL1P78423 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CL1P78423 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.93□□□□□ -0.02
CX3CL1P78423 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CL1P78423 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 FZD10-202ENST00000539839 3282 ntBASIC14.93□□□□□ -0.02
CX3CL1P78423 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CL1P78423 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CL1P78423 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.92□□□□□ -0.02
CX3CL1P78423 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CX3CL1P78423 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 MMP23A-201ENST00000234610 1017 ntBASIC14.92□□□□□ -0.02
CX3CL1P78423 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CX3CL1P78423 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.92□□□□□ -0.02
CX3CL1P78423 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 SLC25A1P2-201ENST00000430693 912 ntBASIC14.92□□□□□ -0.02
CX3CL1P78423 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 C2orf69P3-201ENST00000565542 1120 ntBASIC14.92□□□□□ -0.02
CX3CL1P78423 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.92□□□□□ -0.02
CX3CL1P78423 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CL1P78423 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CX3CL1P78423 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CX3CL1P78423 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CX3CL1P78423 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CL1P78423 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 PKD1P1-201ENST00000458669 6805 ntBASIC14.91□□□□□ -0.02
CX3CL1P78423 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CX3CL1P78423 HEIH-201ENST00000623091 1652 ntBASIC14.91□□□□□ -0.02
CX3CL1P78423 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.91□□□□□ -0.02
CX3CL1P78423 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
CX3CL1P78423 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.91□□□□□ -0.02
CX3CL1P78423 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CX3CL1P78423 AC008622.2-201ENST00000617006 1229 ntBASIC14.91□□□□□ -0.02
CX3CL1P78423 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.91□□□□□ -0.02
CX3CL1P78423 AC068587.9-201ENST00000641814 219 ntBASIC14.91□□□□□ -0.02
CX3CL1P78423 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CX3CL1P78423 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CX3CL1P78423 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms