Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 BX088651.1-201ENST00000540551 451 ntBASIC20.67■□□□□ 0.9
ASIC1P78348 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.67■□□□□ 0.9
ASIC1P78348 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.67■□□□□ 0.9
ASIC1P78348 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ASIC1P78348 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ASIC1P78348 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ASIC1P78348 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
ASIC1P78348 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ASIC1P78348 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ASIC1P78348 CYP2D8P-201ENST00000433633 1490 ntBASIC20.67■□□□□ 0.9
ASIC1P78348 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.67■□□□□ 0.9
ASIC1P78348 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 AL390961.4-201ENST00000623958 2535 ntBASIC20.66■□□□□ 0.9
ASIC1P78348 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.66■□□□□ 0.9
ASIC1P78348 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.66■□□□□ 0.9
ASIC1P78348 AC007663.1-201ENST00000438948 1240 ntBASIC20.66■□□□□ 0.9
ASIC1P78348 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.66■□□□□ 0.9
ASIC1P78348 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.66■□□□□ 0.9
ASIC1P78348 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.66■□□□□ 0.9
ASIC1P78348 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.66■□□□□ 0.9
ASIC1P78348 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ASIC1P78348 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.66■□□□□ 0.9
ASIC1P78348 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ASIC1P78348 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ASIC1P78348 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.66■□□□□ 0.9
ASIC1P78348 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ASIC1P78348 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.65■□□□□ 0.9
ASIC1P78348 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.65■□□□□ 0.9
ASIC1P78348 TSPY14P-201ENST00000303979 915 ntBASIC20.65■□□□□ 0.9
ASIC1P78348 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
ASIC1P78348 CR769767.2-201ENST00000622735 460 ntBASIC20.65■□□□□ 0.9
ASIC1P78348 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.65■□□□□ 0.9
ASIC1P78348 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ASIC1P78348 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.65■□□□□ 0.9
ASIC1P78348 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ASIC1P78348 AL354751.1-201ENST00000412768 1863 ntBASIC20.64■□□□□ 0.9
ASIC1P78348 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ASIC1P78348 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ASIC1P78348 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.64■□□□□ 0.9
ASIC1P78348 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ASIC1P78348 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ASIC1P78348 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.64■□□□□ 0.9
ASIC1P78348 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ASIC1P78348 KRT8P50-201ENST00000562022 1438 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
ASIC1P78348 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 MMP23A-201ENST00000234610 1017 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 INGX-201ENST00000359239 846 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.64■□□□□ 0.89
ASIC1P78348 AP000593.1-201ENST00000393668 712 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.64■□□□□ 0.89
ASIC1P78348 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.64■□□□□ 0.89
ASIC1P78348 EGLN1P1-201ENST00000531623 762 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 NAPSB-206ENST00000562112 1266 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.64■□□□□ 0.89
ASIC1P78348 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.64■□□□□ 0.89
ASIC1P78348 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
ASIC1P78348 AC090340.1-201ENST00000620778 4980 ntBASIC20.64■□□□□ 0.89
ASIC1P78348 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ASIC1P78348 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ASIC1P78348 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ASIC1P78348 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ASIC1P78348 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ASIC1P78348 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.63■□□□□ 0.89
ASIC1P78348 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.63■□□□□ 0.89
ASIC1P78348 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ASIC1P78348 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms