Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S2P56377 AC009065.1-201ENST00000564055 1225 ntBASIC18.02■□□□□ 0.48
AP1S2P56377 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.02■□□□□ 0.48
AP1S2P56377 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S2P56377 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP1S2P56377 AC112497.1-201ENST00000624824 639 ntBASIC18.02■□□□□ 0.48
AP1S2P56377 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S2P56377 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.02■□□□□ 0.48
AP1S2P56377 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.02■□□□□ 0.48
AP1S2P56377 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
AP1S2P56377 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
AP1S2P56377 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.02■□□□□ 0.47
AP1S2P56377 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP1S2P56377 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
AP1S2P56377 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP1S2P56377 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
AP1S2P56377 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.02■□□□□ 0.47
AP1S2P56377 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP1S2P56377 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S2P56377 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AP1S2P56377 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S2P56377 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP1S2P56377 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
AP1S2P56377 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
AP1S2P56377 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.01■□□□□ 0.47
AP1S2P56377 ECEL1P2-202ENST00000465689 757 ntBASIC18.01■□□□□ 0.47
AP1S2P56377 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.01■□□□□ 0.47
AP1S2P56377 MIR3180-4-201ENST00000582223 153 ntBASIC18.01■□□□□ 0.47
AP1S2P56377 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 AC145285.6-201ENST00000604632 637 ntBASIC18.01■□□□□ 0.47
AP1S2P56377 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.01■□□□□ 0.47
AP1S2P56377 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AP1S2P56377 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP1S2P56377 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18■□□□□ 0.47
AP1S2P56377 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18■□□□□ 0.47
AP1S2P56377 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 AL163051.1-201ENST00000569214 1512 ntBASIC18■□□□□ 0.47
AP1S2P56377 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
AP1S2P56377 AC087499.1-201ENST00000418141 1075 ntBASIC18■□□□□ 0.47
AP1S2P56377 GRAMD4P1-201ENST00000435181 1110 ntBASIC18■□□□□ 0.47
AP1S2P56377 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18■□□□□ 0.47
AP1S2P56377 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
AP1S2P56377 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18■□□□□ 0.47
AP1S2P56377 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18■□□□□ 0.47
AP1S2P56377 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S2P56377 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
AP1S2P56377 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
AP1S2P56377 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.99■□□□□ 0.47
AP1S2P56377 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
AP1S2P56377 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
AP1S2P56377 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.99■□□□□ 0.47
AP1S2P56377 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.99■□□□□ 0.47
AP1S2P56377 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
AP1S2P56377 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.99■□□□□ 0.47
AP1S2P56377 NEFHP1-201ENST00000412845 2629 ntBASIC17.99■□□□□ 0.47
AP1S2P56377 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 AC104390.1-201ENST00000555663 520 ntBASIC17.99■□□□□ 0.47
AP1S2P56377 NEK4P2-201ENST00000580004 1012 ntBASIC17.99■□□□□ 0.47
AP1S2P56377 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.99■□□□□ 0.47
AP1S2P56377 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.99■□□□□ 0.47
AP1S2P56377 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
AP1S2P56377 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S2P56377 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms