Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDH4P55283 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH4P55283 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDH4P55283 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 SPDYE13P-201ENST00000445314 798 ntBASIC18.9■□□□□ 0.62
CDH4P55283 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH4P55283 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH4P55283 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH4P55283 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH4P55283 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH4P55283 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH4P55283 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH4P55283 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH4P55283 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CDH4P55283 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH4P55283 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH4P55283 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CDH4P55283 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CDH4P55283 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.89■□□□□ 0.61
CDH4P55283 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH4P55283 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH4P55283 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 AC093503.3-201ENST00000624917 2352 ntBASIC18.88■□□□□ 0.61
CDH4P55283 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDH4P55283 VENTXP5-201ENST00000523979 775 ntBASIC18.88■□□□□ 0.61
CDH4P55283 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH4P55283 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH4P55283 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH4P55283 AC005332.1-201ENST00000577698 1310 ntBASIC18.88■□□□□ 0.61
CDH4P55283 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 SDHAP2-201ENST00000455183 2001 ntBASIC18.88■□□□□ 0.61
CDH4P55283 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH4P55283 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH4P55283 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDH4P55283 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
CDH4P55283 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 MIR662-201ENST00000384847 95 ntBASIC18.87■□□□□ 0.61
CDH4P55283 PCED1CP-201ENST00000419887 785 ntBASIC18.87■□□□□ 0.61
CDH4P55283 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH4P55283 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 AC087289.5-201ENST00000586076 3175 ntBASIC18.87■□□□□ 0.61
CDH4P55283 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH4P55283 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH4P55283 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH4P55283 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH4P55283 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH4P55283 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH4P55283 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
CDH4P55283 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH4P55283 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms