Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 AC092597.1-201ENST00000487352 616 ntBASIC20.24■□□□□ 0.83
NCKAP1LP55160 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 NTF6B-201ENST00000591913 560 ntBASIC20.24■□□□□ 0.83
NCKAP1LP55160 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 AC010331.1-201ENST00000611423 582 ntBASIC20.24■□□□□ 0.83
NCKAP1LP55160 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 AL590326.2-201ENST00000625139 305 ntBASIC20.24■□□□□ 0.83
NCKAP1LP55160 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCKAP1LP55160 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.24■□□□□ 0.83
NCKAP1LP55160 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 AL391807.1-203ENST00000604392 2365 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 HBZP1-201ENST00000354915 429 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 MIR1224-201ENST00000408193 85 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 HLA-F-220ENST00000434407 884 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 AL136038.4-201ENST00000603606 1261 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 AC083849.1-201ENST00000615227 514 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 AC099343.3-201ENST00000605834 2503 ntBASIC20.23■□□□□ 0.83
NCKAP1LP55160 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.23■□□□□ 0.83
NCKAP1LP55160 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCKAP1LP55160 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 AL020996.1-203ENST00000536896 2307 ntBASIC20.22■□□□□ 0.83
NCKAP1LP55160 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 AL671277.2-201ENST00000458060 996 ntBASIC20.22■□□□□ 0.83
NCKAP1LP55160 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKAP1LP55160 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.22■□□□□ 0.83
NCKAP1LP55160 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKAP1LP55160 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKAP1LP55160 SPDYE13P-201ENST00000445314 798 ntBASIC20.21■□□□□ 0.83
NCKAP1LP55160 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms