Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 AL138781.2-201ENST00000617896 1843 ntBASIC11.76□□□□□ -0.53
UBE2AP49459 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2AP49459 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2AP49459 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2AP49459 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
UBE2AP49459 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 KRT18P29-201ENST00000397031 1267 ntBASIC11.75□□□□□ -0.53
UBE2AP49459 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 AC133681.1-201ENST00000465482 601 ntBASIC11.75□□□□□ -0.53
UBE2AP49459 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC11.75□□□□□ -0.53
UBE2AP49459 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.75□□□□□ -0.53
UBE2AP49459 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2AP49459 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2AP49459 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
UBE2AP49459 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2AP49459 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UBE2AP49459 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2AP49459 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2AP49459 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2AP49459 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2AP49459 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UBE2AP49459 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2AP49459 SERF2-207ENST00000409614 582 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2AP49459 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC11.74□□□□□ -0.53
UBE2AP49459 NIFKP9-201ENST00000419265 221 ntBASIC11.74□□□□□ -0.53
UBE2AP49459 TSPY23P-201ENST00000440136 739 ntBASIC11.74□□□□□ -0.53
UBE2AP49459 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UBE2AP49459 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
UBE2AP49459 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2AP49459 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC11.74□□□□□ -0.53
UBE2AP49459 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.74□□□□□ -0.53
UBE2AP49459 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC11.74□□□□□ -0.53
UBE2AP49459 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.74□□□□□ -0.53
UBE2AP49459 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2AP49459 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms