Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 PCDHA12-202ENST00000613593 2588 ntBASIC14.64□□□□□ -0.07
CDC34P49427 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDC34P49427 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDC34P49427 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 MTMR9LP-203ENST00000426597 1545 ntBASIC14.63□□□□□ -0.07
CDC34P49427 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC34P49427 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC34P49427 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC34P49427 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CDC34P49427 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDC34P49427 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC34P49427 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC34P49427 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC34P49427 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 REXO1L9P-201ENST00000604264 2108 ntBASIC14.62□□□□□ -0.07
CDC34P49427 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDC34P49427 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDC34P49427 AL512625.2-201ENST00000417533 625 ntBASIC14.62□□□□□ -0.07
CDC34P49427 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 TSPY23P-201ENST00000440136 739 ntBASIC14.62□□□□□ -0.07
CDC34P49427 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC34P49427 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.62□□□□□ -0.07
CDC34P49427 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC34P49427 AC112777.1-201ENST00000540175 1423 ntBASIC14.62□□□□□ -0.07
CDC34P49427 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.62□□□□□ -0.07
CDC34P49427 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.62□□□□□ -0.07
CDC34P49427 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.62□□□□□ -0.07
CDC34P49427 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CDC34P49427 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC34P49427 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC34P49427 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDC34P49427 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.62□□□□□ -0.07
CDC34P49427 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms