Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR3AP46098 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HTR3AP46098 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR3AP46098 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
HTR3AP46098 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR3AP46098 KRT8P32-201ENST00000512863 1461 ntBASIC17.11■□□□□ 0.33
HTR3AP46098 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR3AP46098 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR3AP46098 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR3AP46098 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HTR3AP46098 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HTR3AP46098 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HTR3AP46098 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 AL512353.2-201ENST00000448759 1962 ntBASIC17.1■□□□□ 0.33
HTR3AP46098 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HTR3AP46098 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HTR3AP46098 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR3AP46098 RBM17P1-201ENST00000453646 1190 ntBASIC17.1■□□□□ 0.33
HTR3AP46098 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.1■□□□□ 0.33
HTR3AP46098 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.1■□□□□ 0.33
HTR3AP46098 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 AC067852.2-201ENST00000590513 2313 ntBASIC17.1■□□□□ 0.33
HTR3AP46098 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR3AP46098 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR3AP46098 HEIH-201ENST00000623091 1652 ntBASIC17.1■□□□□ 0.33
HTR3AP46098 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR3AP46098 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR3AP46098 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HTR3AP46098 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HTR3AP46098 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HTR3AP46098 AC009053.2-201ENST00000563701 2365 ntBASIC17.09■□□□□ 0.33
HTR3AP46098 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HTR3AP46098 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HTR3AP46098 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
HTR3AP46098 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.09■□□□□ 0.33
HTR3AP46098 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.09■□□□□ 0.33
HTR3AP46098 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR3AP46098 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.09■□□□□ 0.33
HTR3AP46098 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.09■□□□□ 0.33
HTR3AP46098 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTR3AP46098 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.09■□□□□ 0.33
HTR3AP46098 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
HTR3AP46098 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.08■□□□□ 0.33
HTR3AP46098 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR3AP46098 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
HTR3AP46098 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.08■□□□□ 0.33
HTR3AP46098 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTR3AP46098 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR3AP46098 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR3AP46098 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR3AP46098 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.08■□□□□ 0.32
HTR3AP46098 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.08■□□□□ 0.32
HTR3AP46098 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.08■□□□□ 0.32
HTR3AP46098 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
HTR3AP46098 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.08■□□□□ 0.32
HTR3AP46098 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 TNRC18P3-201ENST00000441896 2691 ntBASIC17.08■□□□□ 0.32
HTR3AP46098 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
HTR3AP46098 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HTR3AP46098 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR3AP46098 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR3AP46098 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR3AP46098 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR3AP46098 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms