Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CHRNA4P43681 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRNA4P43681 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHRNA4P43681 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.67■□□□□ 0.58
CHRNA4P43681 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.67■□□□□ 0.58
CHRNA4P43681 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.67■□□□□ 0.58
CHRNA4P43681 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.67■□□□□ 0.58
CHRNA4P43681 AC012306.2-201ENST00000609350 630 ntBASIC18.67■□□□□ 0.58
CHRNA4P43681 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRNA4P43681 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
CHRNA4P43681 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHRNA4P43681 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA4P43681 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA4P43681 HOXB1-202ENST00000577092 1414 ntBASIC18.66■□□□□ 0.58
CHRNA4P43681 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHRNA4P43681 AC135050.7-201ENST00000624508 2218 ntBASIC18.66■□□□□ 0.58
CHRNA4P43681 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHRNA4P43681 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA4P43681 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.66■□□□□ 0.58
CHRNA4P43681 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 SLC25A3P1-201ENST00000443844 931 ntBASIC18.66■□□□□ 0.58
CHRNA4P43681 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 AC010203.1-204ENST00000548782 407 ntBASIC18.66■□□□□ 0.58
CHRNA4P43681 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRNA4P43681 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 BICD1-207ENST00000551848 1962 ntBASIC18.66■□□□□ 0.58
CHRNA4P43681 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA4P43681 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRNA4P43681 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRNA4P43681 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA4P43681 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA4P43681 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHRNA4P43681 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRNA4P43681 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA4P43681 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CHRNA4P43681 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.65■□□□□ 0.58
CHRNA4P43681 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA4P43681 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.65■□□□□ 0.58
CHRNA4P43681 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA4P43681 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHRNA4P43681 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHRNA4P43681 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA4P43681 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHRNA4P43681 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CHRNA4P43681 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.64■□□□□ 0.58
CHRNA4P43681 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNA4P43681 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNA4P43681 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNA4P43681 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNA4P43681 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.64■□□□□ 0.58
CHRNA4P43681 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHRNA4P43681 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CHRNA4P43681 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRNA4P43681 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
CHRNA4P43681 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRNA4P43681 AP000593.1-201ENST00000393668 712 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms