Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 TFP1-202ENST00000475455 1573 ntBASIC21.07■□□□□ 0.96
CLCN1P35523 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLCN1P35523 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.07■□□□□ 0.96
CLCN1P35523 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.07■□□□□ 0.96
CLCN1P35523 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.07■□□□□ 0.96
CLCN1P35523 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.07■□□□□ 0.96
CLCN1P35523 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLCN1P35523 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.07■□□□□ 0.96
CLCN1P35523 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.07■□□□□ 0.96
CLCN1P35523 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLCN1P35523 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN1P35523 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN1P35523 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN1P35523 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN1P35523 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN1P35523 RPS2P52-201ENST00000469610 820 ntBASIC21.06■□□□□ 0.96
CLCN1P35523 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.06■□□□□ 0.96
CLCN1P35523 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CLCN1P35523 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CLCN1P35523 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN1P35523 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN1P35523 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN1P35523 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN1P35523 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN1P35523 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN1P35523 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCN1P35523 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN1P35523 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCN1P35523 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN1P35523 ID1-201ENST00000376105 1233 ntBASIC21.05■□□□□ 0.96
CLCN1P35523 AL355802.2-201ENST00000402069 882 ntBASIC21.05■□□□□ 0.96
CLCN1P35523 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.05■□□□□ 0.96
CLCN1P35523 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.05■□□□□ 0.96
CLCN1P35523 PCDHB19P-201ENST00000570871 2371 ntBASIC21.05■□□□□ 0.96
CLCN1P35523 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN1P35523 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN1P35523 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCN1P35523 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN1P35523 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
CLCN1P35523 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.04■□□□□ 0.96
CLCN1P35523 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLCN1P35523 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
CLCN1P35523 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.04■□□□□ 0.96
CLCN1P35523 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CLCN1P35523 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLCN1P35523 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLCN1P35523 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN1P35523 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN1P35523 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CLCN1P35523 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN1P35523 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN1P35523 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms