Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CCND1P24385 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCND1P24385 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCND1P24385 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.64■□□□□ 0.58
CCND1P24385 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.64■□□□□ 0.57
CCND1P24385 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
CCND1P24385 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.64■□□□□ 0.57
CCND1P24385 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.64■□□□□ 0.57
CCND1P24385 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.64■□□□□ 0.57
CCND1P24385 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCND1P24385 AF186192.3-201ENST00000583427 947 ntBASIC18.64■□□□□ 0.57
CCND1P24385 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCND1P24385 AC073195.1-201ENST00000607241 877 ntBASIC18.64■□□□□ 0.57
CCND1P24385 AP001412.1-201ENST00000608405 714 ntBASIC18.64■□□□□ 0.57
CCND1P24385 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.64■□□□□ 0.57
CCND1P24385 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCND1P24385 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.64■□□□□ 0.57
CCND1P24385 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCND1P24385 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
CCND1P24385 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 SDHAP1-207ENST00000440850 2000 ntBASIC18.63■□□□□ 0.57
CCND1P24385 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.63■□□□□ 0.57
CCND1P24385 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.63■□□□□ 0.57
CCND1P24385 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.63■□□□□ 0.57
CCND1P24385 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.63■□□□□ 0.57
CCND1P24385 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCND1P24385 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 KRT16P1-201ENST00000399124 1418 ntBASIC18.63■□□□□ 0.57
CCND1P24385 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.63■□□□□ 0.57
CCND1P24385 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCND1P24385 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCND1P24385 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
CCND1P24385 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.62■□□□□ 0.57
CCND1P24385 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.62■□□□□ 0.57
CCND1P24385 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.62■□□□□ 0.57
CCND1P24385 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCND1P24385 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.62■□□□□ 0.57
CCND1P24385 AC026271.3-201ENST00000571884 352 ntBASIC18.62■□□□□ 0.57
CCND1P24385 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.62■□□□□ 0.57
CCND1P24385 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.62■□□□□ 0.57
CCND1P24385 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.62■□□□□ 0.57
CCND1P24385 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCND1P24385 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms