Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 AC004951.3-201ENST00000418645 1148 ntBASIC17.23■□□□□ 0.35
TNFRSF1BP20333 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 AC006058.3-201ENST00000606217 1069 ntBASIC17.22■□□□□ 0.35
TNFRSF1BP20333 AC011298.2-201ENST00000617989 482 ntBASIC17.22■□□□□ 0.35
TNFRSF1BP20333 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF1BP20333 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 AC008556.1-201ENST00000610908 2040 ntBASIC17.21■□□□□ 0.35
TNFRSF1BP20333 AC134043.2-201ENST00000624206 2238 ntBASIC17.21■□□□□ 0.35
TNFRSF1BP20333 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 CR392000.1-201ENST00000624770 1228 ntBASIC17.21■□□□□ 0.35
TNFRSF1BP20333 MYC-208ENST00000641036 567 ntBASIC17.21■□□□□ 0.35
TNFRSF1BP20333 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TNFRSF1BP20333 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TNFRSF1BP20333 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNFRSF1BP20333 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 KSR1P1-201ENST00000446298 240 ntBASIC17.2■□□□□ 0.34
TNFRSF1BP20333 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF1BP20333 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms