Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.1■□□□□ 0.81
SYN1P17600 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYN1P17600 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.09■□□□□ 0.81
SYN1P17600 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYN1P17600 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.09■□□□□ 0.81
SYN1P17600 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SYN1P17600 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYN1P17600 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.09■□□□□ 0.81
SYN1P17600 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.09■□□□□ 0.81
SYN1P17600 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.09■□□□□ 0.81
SYN1P17600 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.09■□□□□ 0.81
SYN1P17600 HLA-J-203ENST00000494367 1087 ntBASIC20.09■□□□□ 0.81
SYN1P17600 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
SYN1P17600 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
SYN1P17600 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
SYN1P17600 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.09■□□□□ 0.81
SYN1P17600 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.09■□□□□ 0.81
SYN1P17600 AC105339.3-201ENST00000560043 636 ntBASIC20.09■□□□□ 0.81
SYN1P17600 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.09■□□□□ 0.81
SYN1P17600 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SYN1P17600 INTS4P1-201ENST00000438455 1935 ntBASIC20.09■□□□□ 0.81
SYN1P17600 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.09■□□□□ 0.81
SYN1P17600 AL356309.3-201ENST00000624132 1934 ntBASIC20.09■□□□□ 0.81
SYN1P17600 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYN1P17600 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYN1P17600 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYN1P17600 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.08■□□□□ 0.81
SYN1P17600 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.08■□□□□ 0.81
SYN1P17600 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 AL645939.2-201ENST00000427340 991 ntBASIC20.08■□□□□ 0.81
SYN1P17600 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.08■□□□□ 0.81
SYN1P17600 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.08■□□□□ 0.81
SYN1P17600 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYN1P17600 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.08■□□□□ 0.81
SYN1P17600 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.08■□□□□ 0.81
SYN1P17600 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.08■□□□□ 0.81
SYN1P17600 AC073314.1-201ENST00000568729 2216 ntBASIC20.08■□□□□ 0.8
SYN1P17600 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.08■□□□□ 0.8
SYN1P17600 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYN1P17600 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYN1P17600 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SYN1P17600 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYN1P17600 LINC01521-201ENST00000504184 1943 ntBASIC20.08■□□□□ 0.8
SYN1P17600 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.08■□□□□ 0.8
SYN1P17600 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
SYN1P17600 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SYN1P17600 MIR770-201ENST00000390219 98 ntBASIC20.07■□□□□ 0.8
SYN1P17600 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.07■□□□□ 0.8
SYN1P17600 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.07■□□□□ 0.8
SYN1P17600 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SYN1P17600 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.07■□□□□ 0.8
SYN1P17600 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.07■□□□□ 0.8
SYN1P17600 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.07■□□□□ 0.8
SYN1P17600 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SYN1P17600 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.07■□□□□ 0.8
SYN1P17600 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYN1P17600 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SYN1P17600 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.07■□□□□ 0.8
SYN1P17600 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.07■□□□□ 0.8
SYN1P17600 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.07■□□□□ 0.8
SYN1P17600 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SYN1P17600 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.06■□□□□ 0.8
SYN1P17600 PKD1P6-201ENST00000343738 4769 ntBASIC20.06■□□□□ 0.8
SYN1P17600 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.06■□□□□ 0.8
SYN1P17600 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SYN1P17600 COX20P2-201ENST00000452636 358 ntBASIC20.06■□□□□ 0.8
SYN1P17600 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.06■□□□□ 0.8
SYN1P17600 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.06■□□□□ 0.8
SYN1P17600 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.06■□□□□ 0.8
SYN1P17600 AC005829.1-201ENST00000570002 483 ntBASIC20.06■□□□□ 0.8
SYN1P17600 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 AC011467.4-201ENST00000594891 528 ntBASIC20.06■□□□□ 0.8
SYN1P17600 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.06■□□□□ 0.8
SYN1P17600 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SYN1P17600 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYN1P17600 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms