Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.77■□□□□ 0.76
FAM228BP0C875 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FAM228BP0C875 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
FAM228BP0C875 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FAM228BP0C875 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FAM228BP0C875 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FAM228BP0C875 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.76■□□□□ 0.75
FAM228BP0C875 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 PRORSD1P-201ENST00000295112 541 ntBASIC19.76■□□□□ 0.75
FAM228BP0C875 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.76■□□□□ 0.75
FAM228BP0C875 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 MFAP1P1-201ENST00000442257 1255 ntBASIC19.76■□□□□ 0.75
FAM228BP0C875 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.76■□□□□ 0.75
FAM228BP0C875 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.76■□□□□ 0.75
FAM228BP0C875 SLC25A1P4-201ENST00000567977 778 ntBASIC19.76■□□□□ 0.75
FAM228BP0C875 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.76■□□□□ 0.75
FAM228BP0C875 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.76■□□□□ 0.75
FAM228BP0C875 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FAM228BP0C875 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM228BP0C875 KRT8P50-201ENST00000562022 1438 ntBASIC19.76■□□□□ 0.75
FAM228BP0C875 AL135905.2-201ENST00000584934 1404 ntBASIC19.76■□□□□ 0.75
FAM228BP0C875 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
FAM228BP0C875 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.75■□□□□ 0.75
FAM228BP0C875 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FAM228BP0C875 KRT18P29-201ENST00000397031 1267 ntBASIC19.75■□□□□ 0.75
FAM228BP0C875 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 MCCD1P1-208ENST00000445732 328 ntBASIC19.75■□□□□ 0.75
FAM228BP0C875 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.75■□□□□ 0.75
FAM228BP0C875 NUDT16P1-203ENST00000513809 620 ntBASIC19.75■□□□□ 0.75
FAM228BP0C875 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.75■□□□□ 0.75
FAM228BP0C875 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.75■□□□□ 0.75
FAM228BP0C875 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.75■□□□□ 0.75
FAM228BP0C875 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
FAM228BP0C875 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FAM228BP0C875 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FAM228BP0C875 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FAM228BP0C875 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM228BP0C875 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.74■□□□□ 0.75
FAM228BP0C875 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.74■□□□□ 0.75
FAM228BP0C875 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
FAM228BP0C875 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.74■□□□□ 0.75
FAM228BP0C875 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 DGCR10-201ENST00000609839 495 ntBASIC19.74■□□□□ 0.75
FAM228BP0C875 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.74■□□□□ 0.75
FAM228BP0C875 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
FAM228BP0C875 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM228BP0C875 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
FAM228BP0C875 AC134043.2-201ENST00000624206 2238 ntBASIC19.74■□□□□ 0.75
FAM228BP0C875 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.74■□□□□ 0.75
FAM228BP0C875 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FAM228BP0C875 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.73■□□□□ 0.75
FAM228BP0C875 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
FAM228BP0C875 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms