Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CSF1P09603 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CSF1P09603 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.02■□□□□ 0.16
CSF1P09603 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.02■□□□□ 0.16
CSF1P09603 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.02■□□□□ 0.16
CSF1P09603 AC092368.3-202ENST00000574180 1591 ntBASIC16.02■□□□□ 0.16
CSF1P09603 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.02■□□□□ 0.16
CSF1P09603 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.02■□□□□ 0.16
CSF1P09603 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CSF1P09603 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.02■□□□□ 0.16
CSF1P09603 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSF1P09603 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CSF1P09603 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
CSF1P09603 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSF1P09603 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CSF1P09603 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.02■□□□□ 0.15
CSF1P09603 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSF1P09603 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSF1P09603 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSF1P09603 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSF1P09603 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CSF1P09603 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CSF1P09603 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CSF1P09603 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CSF1P09603 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CSF1P09603 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.01■□□□□ 0.15
CSF1P09603 YBX1P10-201ENST00000444752 975 ntBASIC16.01■□□□□ 0.15
CSF1P09603 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.01■□□□□ 0.15
CSF1P09603 RPPH1-201ENST00000516869 333 ntBASIC16.01■□□□□ 0.15
CSF1P09603 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.01■□□□□ 0.15
CSF1P09603 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.01■□□□□ 0.15
CSF1P09603 PNMA6B-201ENST00000538162 1200 ntBASIC16.01■□□□□ 0.15
CSF1P09603 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.01■□□□□ 0.15
CSF1P09603 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CSF1P09603 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSF1P09603 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSF1P09603 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.01■□□□□ 0.15
CSF1P09603 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 AC009053.2-201ENST00000563701 2365 ntBASIC16■□□□□ 0.15
CSF1P09603 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CSF1P09603 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CSF1P09603 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16■□□□□ 0.15
CSF1P09603 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16■□□□□ 0.15
CSF1P09603 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16■□□□□ 0.15
CSF1P09603 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16■□□□□ 0.15
CSF1P09603 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 AC008403.3-201ENST00000598924 454 ntBASIC16■□□□□ 0.15
CSF1P09603 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CSF1P09603 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16■□□□□ 0.15
CSF1P09603 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16■□□□□ 0.15
CSF1P09603 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CSF1P09603 AC135776.1-201ENST00000319817 2481 ntBASIC16■□□□□ 0.15
CSF1P09603 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CSF1P09603 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CSF1P09603 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.99■□□□□ 0.15
CSF1P09603 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSF1P09603 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms