Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.68■□□□□ 0.58
SRPRAP08240 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.68■□□□□ 0.58
SRPRAP08240 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 Z83836.1-201ENST00000624605 1642 ntBASIC18.67■□□□□ 0.58
SRPRAP08240 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.67■□□□□ 0.58
SRPRAP08240 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.67■□□□□ 0.58
SRPRAP08240 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.67■□□□□ 0.58
SRPRAP08240 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.67■□□□□ 0.58
SRPRAP08240 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.67■□□□□ 0.58
SRPRAP08240 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SRPRAP08240 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.67■□□□□ 0.58
SRPRAP08240 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.67■□□□□ 0.58
SRPRAP08240 AC092329.2-201ENST00000598402 547 ntBASIC18.67■□□□□ 0.58
SRPRAP08240 GPR32P1-201ENST00000601788 811 ntBASIC18.67■□□□□ 0.58
SRPRAP08240 AL390719.2-201ENST00000606993 987 ntBASIC18.67■□□□□ 0.58
SRPRAP08240 AC092119.3-201ENST00000612618 583 ntBASIC18.67■□□□□ 0.58
SRPRAP08240 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.67■□□□□ 0.58
SRPRAP08240 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 MYLKP1-201ENST00000509077 1580 ntBASIC18.67■□□□□ 0.58
SRPRAP08240 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPRAP08240 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SRPRAP08240 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.67■□□□□ 0.58
SRPRAP08240 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.66■□□□□ 0.58
SRPRAP08240 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.66■□□□□ 0.58
SRPRAP08240 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SRPRAP08240 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 AC009102.3-201ENST00000623118 1491 ntBASIC18.66■□□□□ 0.58
SRPRAP08240 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.66■□□□□ 0.58
SRPRAP08240 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.66■□□□□ 0.58
SRPRAP08240 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 IGHGP-201ENST00000390555 1178 ntBASIC18.66■□□□□ 0.58
SRPRAP08240 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 AP002383.4-201ENST00000442518 975 ntBASIC18.66■□□□□ 0.58
SRPRAP08240 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.66■□□□□ 0.58
SRPRAP08240 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.66■□□□□ 0.58
SRPRAP08240 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.66■□□□□ 0.58
SRPRAP08240 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
SRPRAP08240 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 AC018445.3-201ENST00000624177 1945 ntBASIC18.66■□□□□ 0.58
SRPRAP08240 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPRAP08240 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.66■□□□□ 0.58
SRPRAP08240 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.65■□□□□ 0.58
SRPRAP08240 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.65■□□□□ 0.58
SRPRAP08240 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.65■□□□□ 0.58
SRPRAP08240 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SRPRAP08240 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.65■□□□□ 0.58
SRPRAP08240 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.65■□□□□ 0.58
SRPRAP08240 MIR3180-1-201ENST00000580374 94 ntBASIC18.65■□□□□ 0.58
SRPRAP08240 AC090616.6-201ENST00000582640 721 ntBASIC18.65■□□□□ 0.58
SRPRAP08240 MIR3180-3-201ENST00000584616 94 ntBASIC18.65■□□□□ 0.58
SRPRAP08240 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRPRAP08240 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.65■□□□□ 0.58
SRPRAP08240 AC008687.5-201ENST00000593746 558 ntBASIC18.65■□□□□ 0.58
SRPRAP08240 RNF165-205ENST00000588679 2904 ntBASIC18.65■□□□□ 0.58
SRPRAP08240 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SRPRAP08240 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRPRAP08240 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRPRAP08240 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPRAP08240 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SRPRAP08240 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SRPRAP08240 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPRAP08240 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SRPRAP08240 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms