Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
OPN1SWP03999 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.32■□□□□ 0.36
OPN1SWP03999 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
OPN1SWP03999 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.32■□□□□ 0.36
OPN1SWP03999 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.32■□□□□ 0.36
OPN1SWP03999 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.32■□□□□ 0.36
OPN1SWP03999 KSR1P1-201ENST00000446298 240 ntBASIC17.32■□□□□ 0.36
OPN1SWP03999 AC008040.2-201ENST00000461049 708 ntBASIC17.32■□□□□ 0.36
OPN1SWP03999 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.32■□□□□ 0.36
OPN1SWP03999 C1QBPP2-201ENST00000528754 825 ntBASIC17.32■□□□□ 0.36
OPN1SWP03999 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.32■□□□□ 0.36
OPN1SWP03999 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
OPN1SWP03999 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
OPN1SWP03999 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.32■□□□□ 0.36
OPN1SWP03999 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.32■□□□□ 0.36
OPN1SWP03999 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.32■□□□□ 0.36
OPN1SWP03999 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPN1SWP03999 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
OPN1SWP03999 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.32■□□□□ 0.36
OPN1SWP03999 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.32■□□□□ 0.36
OPN1SWP03999 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
OPN1SWP03999 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 AP000997.3-201ENST00000623333 2250 ntBASIC17.31■□□□□ 0.36
OPN1SWP03999 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.31■□□□□ 0.36
OPN1SWP03999 AL353708.3-201ENST00000610272 989 ntBASIC17.31■□□□□ 0.36
OPN1SWP03999 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 ESPNP-201ENST00000270691 2015 ntBASIC17.31■□□□□ 0.36
OPN1SWP03999 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
OPN1SWP03999 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.31■□□□□ 0.36
OPN1SWP03999 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPN1SWP03999 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
OPN1SWP03999 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 KRT16P1-201ENST00000399124 1418 ntBASIC17.3■□□□□ 0.36
OPN1SWP03999 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.3■□□□□ 0.36
OPN1SWP03999 CKBP1-201ENST00000565489 1086 ntBASIC17.3■□□□□ 0.36
OPN1SWP03999 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.3■□□□□ 0.36
OPN1SWP03999 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.3■□□□□ 0.36
OPN1SWP03999 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
OPN1SWP03999 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
OPN1SWP03999 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
OPN1SWP03999 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
OPN1SWP03999 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPN1SWP03999 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.29■□□□□ 0.36
OPN1SWP03999 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
OPN1SWP03999 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
OPN1SWP03999 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPN1SWP03999 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
OPN1SWP03999 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.29■□□□□ 0.36
OPN1SWP03999 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPN1SWP03999 AC093677.2-201ENST00000600169 1863 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms