Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOC3P02656 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
APOC3P02656 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOC3P02656 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 AC006455.2-201ENST00000429931 906 ntBASIC14.93□□□□□ -0.02
APOC3P02656 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOC3P02656 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOC3P02656 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOC3P02656 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.92□□□□□ -0.02
APOC3P02656 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
APOC3P02656 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.92□□□□□ -0.02
APOC3P02656 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC3P02656 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APOC3P02656 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.92□□□□□ -0.02
APOC3P02656 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.92□□□□□ -0.02
APOC3P02656 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APOC3P02656 AC083906.6-201ENST00000641366 219 ntBASIC14.92□□□□□ -0.02
APOC3P02656 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC3P02656 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC3P02656 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.92□□□□□ -0.02
APOC3P02656 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
APOC3P02656 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
APOC3P02656 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.92□□□□□ -0.02
APOC3P02656 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
APOC3P02656 AL365209.1-201ENST00000624418 6473 ntBASIC14.92□□□□□ -0.02
APOC3P02656 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC3P02656 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
APOC3P02656 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
APOC3P02656 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC3P02656 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
APOC3P02656 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC3P02656 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.91□□□□□ -0.02
APOC3P02656 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.91□□□□□ -0.02
APOC3P02656 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.91□□□□□ -0.02
APOC3P02656 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC3P02656 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms