Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6AP02538 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6AP02538 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KRT6AP02538 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.96■□□□□ 0.47
KRT6AP02538 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.96■□□□□ 0.47
KRT6AP02538 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 ABHD17AP1-201ENST00000358206 933 ntBASIC17.96■□□□□ 0.47
KRT6AP02538 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 GCSHP5-201ENST00000443090 522 ntBASIC17.96■□□□□ 0.47
KRT6AP02538 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.96■□□□□ 0.47
KRT6AP02538 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.96■□□□□ 0.47
KRT6AP02538 AC008556.1-201ENST00000610908 2040 ntBASIC17.96■□□□□ 0.47
KRT6AP02538 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KRT6AP02538 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
KRT6AP02538 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT6AP02538 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT6AP02538 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KRT6AP02538 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KRT6AP02538 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KRT6AP02538 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 MCCD1P1-208ENST00000445732 328 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 AC098590.1-201ENST00000468126 897 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT6AP02538 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT6AP02538 AC097488.1-201ENST00000507834 756 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 KRT18P41-201ENST00000518924 1277 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.95■□□□□ 0.46
KRT6AP02538 AC233702.5-201ENST00000584107 538 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT6AP02538 AC008622.2-201ENST00000617006 1229 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
KRT6AP02538 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT6AP02538 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 MYLKP1-201ENST00000509077 1580 ntBASIC17.95■□□□□ 0.46
KRT6AP02538 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KRT6AP02538 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT6AP02538 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6AP02538 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT6AP02538 CA15P1-201ENST00000481698 905 ntBASIC17.94■□□□□ 0.46
KRT6AP02538 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT6AP02538 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6AP02538 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6AP02538 AL049637.2-201ENST00000641778 930 ntBASIC17.94■□□□□ 0.46
KRT6AP02538 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT6AP02538 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KRT6AP02538 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT6AP02538 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 LTB4R2-202ENST00000528054 3092 ntBASIC17.94■□□□□ 0.46
KRT6AP02538 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6AP02538 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.94■□□□□ 0.46
KRT6AP02538 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KRT6AP02538 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6AP02538 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT6AP02538 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT6AP02538 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
KRT6AP02538 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT6AP02538 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6AP02538 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms