Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
GGPS1O95749 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
GGPS1O95749 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.76■□□□□ 0.91
GGPS1O95749 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GGPS1O95749 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
GGPS1O95749 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.76■□□□□ 0.91
GGPS1O95749 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.76■□□□□ 0.91
GGPS1O95749 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.76■□□□□ 0.91
GGPS1O95749 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.76■□□□□ 0.91
GGPS1O95749 AC009065.1-201ENST00000564055 1225 ntBASIC20.76■□□□□ 0.91
GGPS1O95749 AL390719.2-201ENST00000606993 987 ntBASIC20.76■□□□□ 0.91
GGPS1O95749 AC083906.6-201ENST00000641366 219 ntBASIC20.76■□□□□ 0.91
GGPS1O95749 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GGPS1O95749 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
GGPS1O95749 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GGPS1O95749 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.75■□□□□ 0.91
GGPS1O95749 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 AP000974.1-201ENST00000623909 2387 ntBASIC20.75■□□□□ 0.91
GGPS1O95749 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.75■□□□□ 0.91
GGPS1O95749 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GGPS1O95749 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.75■□□□□ 0.91
GGPS1O95749 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
GGPS1O95749 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
GGPS1O95749 TPSP2-201ENST00000561760 610 ntBASIC20.75■□□□□ 0.91
GGPS1O95749 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.75■□□□□ 0.91
GGPS1O95749 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.75■□□□□ 0.91
GGPS1O95749 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.75■□□□□ 0.91
GGPS1O95749 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.75■□□□□ 0.91
GGPS1O95749 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 RNF165-205ENST00000588679 2904 ntBASIC20.75■□□□□ 0.91
GGPS1O95749 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GGPS1O95749 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.75■□□□□ 0.91
GGPS1O95749 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GGPS1O95749 TNXA-203ENST00000507684 2038 ntBASIC20.75■□□□□ 0.91
GGPS1O95749 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GGPS1O95749 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.74■□□□□ 0.91
GGPS1O95749 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.74■□□□□ 0.91
GGPS1O95749 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.74■□□□□ 0.91
GGPS1O95749 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.74■□□□□ 0.91
GGPS1O95749 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.74■□□□□ 0.91
GGPS1O95749 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.74■□□□□ 0.91
GGPS1O95749 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.74■□□□□ 0.91
GGPS1O95749 KRT18P41-201ENST00000518924 1277 ntBASIC20.74■□□□□ 0.91
GGPS1O95749 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.74■□□□□ 0.91
GGPS1O95749 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.74■□□□□ 0.91
GGPS1O95749 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 AC024563.2-201ENST00000603282 481 ntBASIC20.74■□□□□ 0.91
GGPS1O95749 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.74■□□□□ 0.91
GGPS1O95749 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GGPS1O95749 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.74■□□□□ 0.91
GGPS1O95749 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GGPS1O95749 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GGPS1O95749 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
GGPS1O95749 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.74■□□□□ 0.91
GGPS1O95749 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GGPS1O95749 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.73■□□□□ 0.91
GGPS1O95749 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
GGPS1O95749 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GGPS1O95749 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.73■□□□□ 0.91
GGPS1O95749 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.73■□□□□ 0.91
GGPS1O95749 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.73■□□□□ 0.91
GGPS1O95749 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.73■□□□□ 0.91
GGPS1O95749 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms