Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 Z98044.1-201ENST00000632503 1764 ntBASIC27.67■■■□□ 2.02
RAPGEF3O95398 LBX2-AS1-202ENST00000603175 2083 ntBASIC27.67■■■□□ 2.02
RAPGEF3O95398 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF3O95398 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC27.67■■■□□ 2.02
RAPGEF3O95398 AC125634.1-201ENST00000438758 1403 ntBASIC27.67■■■□□ 2.02
RAPGEF3O95398 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 KRT18P2-201ENST00000447938 1258 ntBASIC27.66■■■□□ 2.02
RAPGEF3O95398 ALG1L5P-201ENST00000482043 771 ntBASIC27.66■■■□□ 2.02
RAPGEF3O95398 AC113404.2-201ENST00000507884 177 ntBASIC27.66■■■□□ 2.02
RAPGEF3O95398 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 AC064836.3-201ENST00000607928 673 ntBASIC27.66■■■□□ 2.02
RAPGEF3O95398 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAPGEF3O95398 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC27.66■■■□□ 2.02
RAPGEF3O95398 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
RAPGEF3O95398 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 FEM1AP3-201ENST00000403722 1741 ntBASIC27.65■■■□□ 2.02
RAPGEF3O95398 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
RAPGEF3O95398 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.65■■■□□ 2.02
RAPGEF3O95398 MCCD1P2-201ENST00000423228 335 ntBASIC27.65■■■□□ 2.02
RAPGEF3O95398 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.65■■■□□ 2.02
RAPGEF3O95398 SNHG9-202ENST00000564014 471 ntBASIC27.65■■■□□ 2.02
RAPGEF3O95398 AC005829.1-201ENST00000570002 483 ntBASIC27.65■■■□□ 2.02
RAPGEF3O95398 MIR4469-201ENST00000583919 79 ntBASIC27.65■■■□□ 2.02
RAPGEF3O95398 AC239800.4-201ENST00000603712 296 ntBASIC27.65■■■□□ 2.02
RAPGEF3O95398 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.65■■■□□ 2.02
RAPGEF3O95398 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
RAPGEF3O95398 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAPGEF3O95398 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RAPGEF3O95398 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 NARF-204ENST00000390006 1766 ntTSL 2 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RAPGEF3O95398 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
RAPGEF3O95398 AL645939.2-201ENST00000427340 991 ntBASIC27.64■■■□□ 2.02
RAPGEF3O95398 AC244107.1-201ENST00000442033 332 ntBASIC27.64■■■□□ 2.02
RAPGEF3O95398 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.64■■■□□ 2.02
RAPGEF3O95398 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RAPGEF3O95398 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
RAPGEF3O95398 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 LHX6-205ENST00000464484 666 ntTSL 2 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 COX5A-206ENST00000568783 571 ntTSL 3 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
RAPGEF3O95398 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RAPGEF3O95398 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RAPGEF3O95398 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
RAPGEF3O95398 AL163051.1-201ENST00000569214 1512 ntBASIC27.62■■■□□ 2.01
RAPGEF3O95398 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RAPGEF3O95398 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RAPGEF3O95398 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC27.62■■■□□ 2.01
RAPGEF3O95398 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RAPGEF3O95398 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RAPGEF3O95398 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
RAPGEF3O95398 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RAPGEF3O95398 WDR53-203ENST00000429115 683 ntTSL 2 BASIC27.62■■■□□ 2.01
RAPGEF3O95398 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC27.62■■■□□ 2.01
RAPGEF3O95398 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC27.62■■■□□ 2.01
RAPGEF3O95398 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms