Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.63■□□□□ 0.57
VAPBO95292 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 MYLKP1-201ENST00000509077 1580 ntBASIC18.63■□□□□ 0.57
VAPBO95292 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.62■□□□□ 0.57
VAPBO95292 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
VAPBO95292 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 SNORA78-201ENST00000459373 127 ntBASIC18.62■□□□□ 0.57
VAPBO95292 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.62■□□□□ 0.57
VAPBO95292 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.62■□□□□ 0.57
VAPBO95292 AP000525.1-201ENST00000608286 694 ntBASIC18.62■□□□□ 0.57
VAPBO95292 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
VAPBO95292 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
VAPBO95292 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.62■□□□□ 0.57
VAPBO95292 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VAPBO95292 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VAPBO95292 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.61■□□□□ 0.57
VAPBO95292 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VAPBO95292 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.61■□□□□ 0.57
VAPBO95292 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
VAPBO95292 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VAPBO95292 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VAPBO95292 MIR4674-201ENST00000582457 87 ntBASIC18.61■□□□□ 0.57
VAPBO95292 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
VAPBO95292 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.61■□□□□ 0.57
VAPBO95292 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAPBO95292 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
VAPBO95292 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.6■□□□□ 0.57
VAPBO95292 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
VAPBO95292 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 AL390955.1-201ENST00000428694 934 ntBASIC18.6■□□□□ 0.57
VAPBO95292 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.6■□□□□ 0.57
VAPBO95292 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.6■□□□□ 0.57
VAPBO95292 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VAPBO95292 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 KRT18P41-201ENST00000518924 1277 ntBASIC18.6■□□□□ 0.57
VAPBO95292 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.6■□□□□ 0.57
VAPBO95292 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
VAPBO95292 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VAPBO95292 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VAPBO95292 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAPBO95292 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
VAPBO95292 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VAPBO95292 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.6■□□□□ 0.57
VAPBO95292 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.6■□□□□ 0.57
VAPBO95292 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VAPBO95292 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms