Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.95■□□□□ 0.46
CNOT3O75175 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CNOT3O75175 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CNOT3O75175 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 AK4P3-201ENST00000418260 669 ntBASIC17.94■□□□□ 0.46
CNOT3O75175 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.94■□□□□ 0.46
CNOT3O75175 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.94■□□□□ 0.46
CNOT3O75175 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.94■□□□□ 0.46
CNOT3O75175 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.94■□□□□ 0.46
CNOT3O75175 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 AC141257.4-201ENST00000634557 245 ntBASIC17.94■□□□□ 0.46
CNOT3O75175 AC136944.6-201ENST00000634818 245 ntBASIC17.94■□□□□ 0.46
CNOT3O75175 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNOT3O75175 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CNOT3O75175 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNOT3O75175 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNOT3O75175 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CNOT3O75175 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.93■□□□□ 0.46
CNOT3O75175 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNOT3O75175 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.93■□□□□ 0.46
CNOT3O75175 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNOT3O75175 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CNOT3O75175 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.93■□□□□ 0.46
CNOT3O75175 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT3O75175 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.92■□□□□ 0.46
CNOT3O75175 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNOT3O75175 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CNOT3O75175 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.92■□□□□ 0.46
CNOT3O75175 KRT8P45-201ENST00000414328 1447 ntBASIC17.92■□□□□ 0.46
CNOT3O75175 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CNOT3O75175 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT3O75175 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT3O75175 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNOT3O75175 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT3O75175 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNOT3O75175 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms