Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 ABALON-201ENST00000629058 1903 ntBASIC17.81■□□□□ 0.44
PRAMEF4O60810 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 KRT18P23-201ENST00000435622 1283 ntBASIC17.81■□□□□ 0.44
PRAMEF4O60810 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 AL163051.1-201ENST00000569214 1512 ntBASIC17.81■□□□□ 0.44
PRAMEF4O60810 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 LINC01568-207ENST00000641790 1380 ntBASIC17.8■□□□□ 0.44
PRAMEF4O60810 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 AL162741.1-201ENST00000565563 1558 ntBASIC17.8■□□□□ 0.44
PRAMEF4O60810 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 NOC2LP1-202ENST00000452600 2235 ntBASIC17.8■□□□□ 0.44
PRAMEF4O60810 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEF4O60810 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEF4O60810 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 AC018470.1-201ENST00000624790 3129 ntBASIC17.79■□□□□ 0.44
PRAMEF4O60810 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.79■□□□□ 0.44
PRAMEF4O60810 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 AC128688.1-201ENST00000487626 519 ntBASIC17.79■□□□□ 0.44
PRAMEF4O60810 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PRAMEF4O60810 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEF4O60810 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms