Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.4■□□□□ 0.54
KLHL41O60662 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.4■□□□□ 0.54
KLHL41O60662 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KLHL41O60662 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.4■□□□□ 0.54
KLHL41O60662 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.4■□□□□ 0.54
KLHL41O60662 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KLHL41O60662 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL41O60662 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KLHL41O60662 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KLHL41O60662 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KLHL41O60662 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KLHL41O60662 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KLHL41O60662 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.39■□□□□ 0.53
KLHL41O60662 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.39■□□□□ 0.53
KLHL41O60662 UNC93B2-201ENST00000285383 730 ntBASIC18.39■□□□□ 0.53
KLHL41O60662 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
KLHL41O60662 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.39■□□□□ 0.53
KLHL41O60662 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 KSR1P1-201ENST00000446298 240 ntBASIC18.39■□□□□ 0.53
KLHL41O60662 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.39■□□□□ 0.53
KLHL41O60662 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
KLHL41O60662 KRT18P16-201ENST00000510337 1294 ntBASIC18.39■□□□□ 0.53
KLHL41O60662 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.39■□□□□ 0.53
KLHL41O60662 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.39■□□□□ 0.53
KLHL41O60662 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL41O60662 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KLHL41O60662 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.38■□□□□ 0.53
KLHL41O60662 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 NUDT16P1-203ENST00000513809 620 ntBASIC18.38■□□□□ 0.53
KLHL41O60662 KRT18P21-201ENST00000515767 1272 ntBASIC18.38■□□□□ 0.53
KLHL41O60662 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.38■□□□□ 0.53
KLHL41O60662 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.38■□□□□ 0.53
KLHL41O60662 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KLHL41O60662 AC012306.2-201ENST00000609350 630 ntBASIC18.38■□□□□ 0.53
KLHL41O60662 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.38■□□□□ 0.53
KLHL41O60662 AC010331.1-201ENST00000611423 582 ntBASIC18.38■□□□□ 0.53
KLHL41O60662 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.38■□□□□ 0.53
KLHL41O60662 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KLHL41O60662 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL41O60662 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL41O60662 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.38■□□□□ 0.53
KLHL41O60662 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL41O60662 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
KLHL41O60662 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL41O60662 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms