Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 AC068587.6-202ENST00000641839 5619 ntBASIC15.79■□□□□ 0.12
SSNA1O43805 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.79■□□□□ 0.12
SSNA1O43805 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SSNA1O43805 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.79■□□□□ 0.12
SSNA1O43805 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SSNA1O43805 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.79■□□□□ 0.12
SSNA1O43805 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SSNA1O43805 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SSNA1O43805 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSNA1O43805 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.78■□□□□ 0.12
SSNA1O43805 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.78■□□□□ 0.12
SSNA1O43805 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.78■□□□□ 0.12
SSNA1O43805 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SSNA1O43805 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.78■□□□□ 0.12
SSNA1O43805 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.78■□□□□ 0.12
SSNA1O43805 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.78■□□□□ 0.12
SSNA1O43805 SLC7A5P1-201ENST00000568957 537 ntBASIC15.78■□□□□ 0.12
SSNA1O43805 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.78■□□□□ 0.12
SSNA1O43805 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SSNA1O43805 MFSD11-216ENST00000590393 1141 ntBASIC15.78■□□□□ 0.12
SSNA1O43805 REXO1L9P-201ENST00000604264 2108 ntBASIC15.78■□□□□ 0.12
SSNA1O43805 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.78■□□□□ 0.12
SSNA1O43805 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.78■□□□□ 0.12
SSNA1O43805 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.78■□□□□ 0.12
SSNA1O43805 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSNA1O43805 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SSNA1O43805 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SSNA1O43805 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.77■□□□□ 0.12
SSNA1O43805 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SSNA1O43805 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SSNA1O43805 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms