Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH17O14917 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH17O14917 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH17O14917 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH17O14917 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH17O14917 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 AL390961.4-201ENST00000623958 2535 ntBASIC17.68■□□□□ 0.42
PCDH17O14917 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PCDH17O14917 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
PCDH17O14917 AL512353.2-201ENST00000448759 1962 ntBASIC17.68■□□□□ 0.42
PCDH17O14917 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDH17O14917 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH17O14917 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH17O14917 AC087388.1-201ENST00000571370 1112 ntBASIC17.68■□□□□ 0.42
PCDH17O14917 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH17O14917 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH17O14917 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDH17O14917 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH17O14917 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH17O14917 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH17O14917 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH17O14917 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.68■□□□□ 0.42
PCDH17O14917 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDH17O14917 AC018470.1-201ENST00000624790 3129 ntBASIC17.67■□□□□ 0.42
PCDH17O14917 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 AC092647.4-201ENST00000457211 535 ntBASIC17.67■□□□□ 0.42
PCDH17O14917 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH17O14917 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH17O14917 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 AC139887.4-201ENST00000607877 719 ntBASIC17.67■□□□□ 0.42
PCDH17O14917 AC008622.2-201ENST00000617006 1229 ntBASIC17.67■□□□□ 0.42
PCDH17O14917 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH17O14917 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDH17O14917 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH17O14917 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH17O14917 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH17O14917 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDH17O14917 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 AC005332.8-201ENST00000622750 2735 ntBASIC17.66■□□□□ 0.42
PCDH17O14917 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH17O14917 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH17O14917 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDH17O14917 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH17O14917 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH17O14917 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH17O14917 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH17O14917 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH17O14917 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms