Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TNFRSF11BO00300 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 AC008556.1-201ENST00000610908 2040 ntBASIC17.15■□□□□ 0.34
TNFRSF11BO00300 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.15■□□□□ 0.34
TNFRSF11BO00300 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 REXO1L9P-201ENST00000604264 2108 ntBASIC17.15■□□□□ 0.34
TNFRSF11BO00300 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TNFRSF11BO00300 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
TNFRSF11BO00300 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TNFRSF11BO00300 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 PRSS44-201ENST00000515154 1146 ntBASIC17.14■□□□□ 0.33
TNFRSF11BO00300 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 AC133041.1-202ENST00000642053 222 ntBASIC17.14■□□□□ 0.33
TNFRSF11BO00300 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF11BO00300 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF11BO00300 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms