Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 HCG11-201ENST00000411553 5696 ntBASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 AC024563.2-201ENST00000603282 481 ntBASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 AL049812.1-201ENST00000432563 2267 ntBASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TBC1D3FA6NER0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 IGHV3-41-201ENST00000613121 348 ntBASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TBC1D3FA6NER0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 KRT8P50-201ENST00000562022 1438 ntBASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 AC005332.7-201ENST00000614046 2005 ntBASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 AP000867.3-201ENST00000524675 377 ntBASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 AC090616.6-201ENST00000582640 721 ntBASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TBC1D3FA6NER0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms