Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 KRASP1-201ENST00000407852 552 ntBASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 UBE2SP1-201ENST00000450587 669 ntBASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 AC110285.5-201ENST00000611501 352 ntBASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 AC018553.1-201ENST00000616682 1458 ntBASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 TFP1-202ENST00000475455 1573 ntBASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP4B1Q9Y6B7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 AP006294.2-201ENST00000641667 209 ntBASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 NBPF21P-201ENST00000425093 1451 ntBASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP4B1Q9Y6B7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4B1Q9Y6B7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms