Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 HLA-F-220ENST00000434407 884 ntBASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 AL020996.1-203ENST00000536896 2307 ntBASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHB2Q9Y5E7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB2Q9Y5E7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB2Q9Y5E7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHB2Q9Y5E7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PCDHB2Q9Y5E7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHB2Q9Y5E7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 AL391807.1-203ENST00000604392 2365 ntBASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 AL136038.4-201ENST00000603606 1261 ntBASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 AC010240.3-201ENST00000607688 395 ntBASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 AC068587.9-201ENST00000641814 219 ntBASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB2Q9Y5E7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 AC034236.2-201ENST00000606662 1610 ntBASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 AC011498.5-201ENST00000592027 486 ntBASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB2Q9Y5E7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 KRT18P48-201ENST00000434763 852 ntBASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 AC083906.6-201ENST00000641366 219 ntBASIC20.24■□□□□ 0.83
PCDHB2Q9Y5E7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms