Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 KRT8P50-201ENST00000562022 1438 ntBASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00588Q9Y4M8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 MIR662-201ENST00000384847 95 ntBASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 AP000593.1-201ENST00000393668 712 ntBASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 PVRIG2P-201ENST00000435460 978 ntBASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00588Q9Y4M8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 HCG4P8-203ENST00000443049 980 ntBASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 BX276092.5-203ENST00000456199 560 ntBASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 KRT18P56-201ENST00000507275 550 ntBASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 KRT18P41-201ENST00000518924 1277 ntBASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00588Q9Y4M8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00588Q9Y4M8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms