Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 AC126335.2-201ENST00000623362 4637 ntBASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CDC42SE1Q9NRR8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 AC087386.2-201ENST00000623212 4637 ntBASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CDC42SE1Q9NRR8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms