Protein–RNA interactions for Protein: Q9NQ75

CASS4, Cas scaffolding protein family member 4, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4Q9NQ75 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 AP003071.4-201ENST00000562276 1284 ntBASIC18.84■□□□□ 0.61
CASS4Q9NQ75 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 AP005242.2-201ENST00000580065 1175 ntBASIC18.84■□□□□ 0.61
CASS4Q9NQ75 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 AL162741.1-201ENST00000565563 1558 ntBASIC18.84■□□□□ 0.61
CASS4Q9NQ75 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.84■□□□□ 0.61
CASS4Q9NQ75 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CASS4Q9NQ75 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
CASS4Q9NQ75 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 MCCD1P1-208ENST00000445732 328 ntBASIC18.83■□□□□ 0.6
CASS4Q9NQ75 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 KRT18P21-201ENST00000515767 1272 ntBASIC18.83■□□□□ 0.6
CASS4Q9NQ75 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.83■□□□□ 0.6
CASS4Q9NQ75 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CASS4Q9NQ75 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 MYLKP1-201ENST00000509077 1580 ntBASIC18.82■□□□□ 0.6
CASS4Q9NQ75 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 SNORA78-201ENST00000459373 127 ntBASIC18.82■□□□□ 0.6
CASS4Q9NQ75 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CASS4Q9NQ75 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 RBM17P1-201ENST00000453646 1190 ntBASIC18.81■□□□□ 0.6
CASS4Q9NQ75 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 MIR4674-201ENST00000582457 87 ntBASIC18.81■□□□□ 0.6
CASS4Q9NQ75 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASS4Q9NQ75 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms