Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 RASA4DP-201ENST00000460726 1199 ntBASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0A4Q9HBG4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 ZNF444P1-201ENST00000559497 298 ntBASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0A4Q9HBG4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 MIR3917-201ENST00000580971 93 ntBASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 AC010240.3-201ENST00000607688 395 ntBASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP6V0A4Q9HBG4 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 KRT18P41-201ENST00000518924 1277 ntBASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP6V0A4Q9HBG4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms