Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNDIG1Q9H7V2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNDIG1Q9H7V2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNDIG1Q9H7V2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNDIG1Q9H7V2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNDIG1Q9H7V2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 AC011498.5-201ENST00000592027 486 ntBASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNDIG1Q9H7V2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNDIG1Q9H7V2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 RCC2P3-201ENST00000418112 1537 ntBASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SYNDIG1Q9H7V2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNDIG1Q9H7V2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNDIG1Q9H7V2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.08■□□□□ 0.49
SYNDIG1Q9H7V2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNDIG1Q9H7V2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNDIG1Q9H7V2 TNXA-203ENST00000507684 2038 ntBASIC18.08■□□□□ 0.49
SYNDIG1Q9H7V2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms