Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 AC007663.1-201ENST00000438948 1240 ntBASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 AC010203.1-204ENST00000548782 407 ntBASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 AL023803.3-201ENST00000615559 522 ntBASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ZFP3Q96NJ6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 LINC01238-205ENST00000567549 1107 ntBASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 AL390961.4-201ENST00000623958 2535 ntBASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZFP3Q96NJ6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 DUX4L26-201ENST00000489078 1255 ntBASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZFP3Q96NJ6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZFP3Q96NJ6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZFP3Q96NJ6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms