Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 AC090340.1-201ENST00000620778 4980 ntBASIC19.11■□□□□ 0.65
IFT43Q96FT9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IFT43Q96FT9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.11■□□□□ 0.65
IFT43Q96FT9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 CCR12P-201ENST00000446203 998 ntBASIC19.1■□□□□ 0.65
IFT43Q96FT9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
IFT43Q96FT9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.1■□□□□ 0.65
IFT43Q96FT9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.1■□□□□ 0.65
IFT43Q96FT9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 AC116562.4-202ENST00000641738 218 ntBASIC19.1■□□□□ 0.65
IFT43Q96FT9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.1■□□□□ 0.65
IFT43Q96FT9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
IFT43Q96FT9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
IFT43Q96FT9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IFT43Q96FT9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 KRT8P3-201ENST00000519669 1449 ntBASIC19.09■□□□□ 0.65
IFT43Q96FT9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 HMGA1P5-201ENST00000412453 271 ntBASIC19.09■□□□□ 0.65
IFT43Q96FT9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 ECEL1P2-202ENST00000465689 757 ntBASIC19.09■□□□□ 0.65
IFT43Q96FT9 DUX4L26-201ENST00000489078 1255 ntBASIC19.09■□□□□ 0.65
IFT43Q96FT9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 AC010203.1-204ENST00000548782 407 ntBASIC19.09■□□□□ 0.65
IFT43Q96FT9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
IFT43Q96FT9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IFT43Q96FT9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
IFT43Q96FT9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IFT43Q96FT9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
IFT43Q96FT9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
IFT43Q96FT9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IFT43Q96FT9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
IFT43Q96FT9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.08■□□□□ 0.65
IFT43Q96FT9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IFT43Q96FT9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IFT43Q96FT9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.08■□□□□ 0.64
IFT43Q96FT9 FAM87A-204ENST00000613235 858 ntBASIC19.08■□□□□ 0.64
IFT43Q96FT9 AC010653.2-201ENST00000623505 997 ntBASIC19.08■□□□□ 0.64
IFT43Q96FT9 AC083906.6-201ENST00000641366 219 ntBASIC19.08■□□□□ 0.64
IFT43Q96FT9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
IFT43Q96FT9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
IFT43Q96FT9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IFT43Q96FT9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
IFT43Q96FT9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IFT43Q96FT9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
IFT43Q96FT9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms