Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.01■■□□□ 1.11
DDX11Q96FC9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 AC011558.1-201ENST00000623459 338 ntBASIC22.01■■□□□ 1.11
DDX11Q96FC9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX11Q96FC9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX11Q96FC9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22■■□□□ 1.11
DDX11Q96FC9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22■■□□□ 1.11
DDX11Q96FC9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 ANKRD20A18P-201ENST00000359341 492 ntBASIC22■■□□□ 1.11
DDX11Q96FC9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22■■□□□ 1.11
DDX11Q96FC9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 AC140113.3-201ENST00000605663 199 ntBASIC22■■□□□ 1.11
DDX11Q96FC9 AC091076.1-201ENST00000610741 619 ntBASIC22■■□□□ 1.11
DDX11Q96FC9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 AL358472.4-201ENST00000633140 710 ntBASIC22■■□□□ 1.11
DDX11Q96FC9 AL031432.5-201ENST00000641059 760 ntBASIC22■■□□□ 1.11
DDX11Q96FC9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22■■□□□ 1.11
DDX11Q96FC9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22■■□□□ 1.11
DDX11Q96FC9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
DDX11Q96FC9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22■■□□□ 1.11
DDX11Q96FC9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22■■□□□ 1.11
DDX11Q96FC9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX11Q96FC9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.99■■□□□ 1.11
DDX11Q96FC9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 PRSS44-201ENST00000515154 1146 ntBASIC21.99■■□□□ 1.11
DDX11Q96FC9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
DDX11Q96FC9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX11Q96FC9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 AL031133.1-201ENST00000406807 723 ntBASIC21.98■■□□□ 1.11
DDX11Q96FC9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms